Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BVC80_1779g43 | BVC80_1837g72 | A0A200QP70 | A0A200R3I0 | Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. | SANT/Myb domain. | 0.530 |
BVC80_1779g43 | BVC80_8843g2 | A0A200QP70 | A0A200PZY4 | Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. | DNA repair protein Rad50. | 0.612 |
BVC80_1779g43 | BVC80_9073g15 | A0A200QP70 | A0A200PTP6 | Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. | Telomeric single stranded DNA binding POT1/Cdc13. | 0.971 |
BVC80_1779g43 | BVC80_9085g120 | A0A200QP70 | A0A200PR49 | Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. | Telomeric single stranded DNA binding POT1/Cdc13. | 0.971 |
BVC80_1837g72 | BVC80_1779g43 | A0A200R3I0 | A0A200QP70 | SANT/Myb domain. | Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. | 0.530 |
BVC80_1837g72 | BVC80_8563g8 | A0A200R3I0 | A0A200QIM8 | SANT/Myb domain. | Forkhead-associated (FHA) domain. | 0.426 |
BVC80_1837g72 | BVC80_8843g2 | A0A200R3I0 | A0A200PZY4 | SANT/Myb domain. | DNA repair protein Rad50. | 0.420 |
BVC80_1837g72 | BVC80_9073g15 | A0A200R3I0 | A0A200PTP6 | SANT/Myb domain. | Telomeric single stranded DNA binding POT1/Cdc13. | 0.479 |
BVC80_1837g72 | BVC80_9085g120 | A0A200R3I0 | A0A200PR49 | SANT/Myb domain. | Telomeric single stranded DNA binding POT1/Cdc13. | 0.479 |
BVC80_8563g8 | BVC80_1837g72 | A0A200QIM8 | A0A200R3I0 | Forkhead-associated (FHA) domain. | SANT/Myb domain. | 0.426 |
BVC80_8563g8 | BVC80_8843g2 | A0A200QIM8 | A0A200PZY4 | Forkhead-associated (FHA) domain. | DNA repair protein Rad50. | 0.998 |
BVC80_8563g8 | BVC80_9073g15 | A0A200QIM8 | A0A200PTP6 | Forkhead-associated (FHA) domain. | Telomeric single stranded DNA binding POT1/Cdc13. | 0.576 |
BVC80_8563g8 | BVC80_9085g120 | A0A200QIM8 | A0A200PR49 | Forkhead-associated (FHA) domain. | Telomeric single stranded DNA binding POT1/Cdc13. | 0.576 |
BVC80_8843g2 | BVC80_1779g43 | A0A200PZY4 | A0A200QP70 | DNA repair protein Rad50. | Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. | 0.612 |
BVC80_8843g2 | BVC80_1837g72 | A0A200PZY4 | A0A200R3I0 | DNA repair protein Rad50. | SANT/Myb domain. | 0.420 |
BVC80_8843g2 | BVC80_8563g8 | A0A200PZY4 | A0A200QIM8 | DNA repair protein Rad50. | Forkhead-associated (FHA) domain. | 0.998 |
BVC80_8843g2 | BVC80_9073g15 | A0A200PZY4 | A0A200PTP6 | DNA repair protein Rad50. | Telomeric single stranded DNA binding POT1/Cdc13. | 0.581 |
BVC80_8843g2 | BVC80_9085g120 | A0A200PZY4 | A0A200PR49 | DNA repair protein Rad50. | Telomeric single stranded DNA binding POT1/Cdc13. | 0.581 |
BVC80_9073g15 | BVC80_1779g43 | A0A200PTP6 | A0A200QP70 | Telomeric single stranded DNA binding POT1/Cdc13. | Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. | 0.971 |
BVC80_9073g15 | BVC80_1837g72 | A0A200PTP6 | A0A200R3I0 | Telomeric single stranded DNA binding POT1/Cdc13. | SANT/Myb domain. | 0.479 |
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