Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BVC80_1321g54 | BVC80_1707g146 | A0A200Q0D2 | A0A200Q6B5 | RNA recognition motif domain. | Small nuclear ribonucleoprotein G. | 0.981 |
BVC80_1321g54 | BVC80_1837g79 | A0A200Q0D2 | A0A200R3I9 | RNA recognition motif domain. | Uncharacterized protein. | 0.425 |
BVC80_1321g54 | BVC80_243g55 | A0A200Q0D2 | A0A200R184 | RNA recognition motif domain. | Small nuclear ribonucleoprotein-associated protein. | 0.980 |
BVC80_1321g54 | BVC80_8289g2 | A0A200Q0D2 | A0A200Q0F6 | RNA recognition motif domain. | G-patch domain. | 0.817 |
BVC80_1321g54 | BVC80_8745g6 | A0A200Q0D2 | A0A200QG22 | RNA recognition motif domain. | Small nuclear ribonucleoprotein E. | 0.980 |
BVC80_1321g54 | BVC80_9093g61 | A0A200Q0D2 | A0A200PWX9 | RNA recognition motif domain. | PHF5-like. | 0.977 |
BVC80_1707g146 | BVC80_1321g54 | A0A200Q6B5 | A0A200Q0D2 | Small nuclear ribonucleoprotein G. | RNA recognition motif domain. | 0.981 |
BVC80_1707g146 | BVC80_1837g19 | A0A200Q6B5 | A0A200R3C6 | Small nuclear ribonucleoprotein G. | RNA recognition motif domain. | 0.981 |
BVC80_1707g146 | BVC80_1837g79 | A0A200Q6B5 | A0A200R3I9 | Small nuclear ribonucleoprotein G. | Uncharacterized protein. | 0.451 |
BVC80_1707g146 | BVC80_243g55 | A0A200Q6B5 | A0A200R184 | Small nuclear ribonucleoprotein G. | Small nuclear ribonucleoprotein-associated protein. | 0.997 |
BVC80_1707g146 | BVC80_8289g2 | A0A200Q6B5 | A0A200Q0F6 | Small nuclear ribonucleoprotein G. | G-patch domain. | 0.842 |
BVC80_1707g146 | BVC80_8745g6 | A0A200Q6B5 | A0A200QG22 | Small nuclear ribonucleoprotein G. | Small nuclear ribonucleoprotein E. | 0.999 |
BVC80_1707g146 | BVC80_9091g139 | A0A200Q6B5 | A0A200PWN6 | Small nuclear ribonucleoprotein G. | RNA recognition motif domain. | 0.981 |
BVC80_1707g146 | BVC80_9093g61 | A0A200Q6B5 | A0A200PWX9 | Small nuclear ribonucleoprotein G. | PHF5-like. | 0.999 |
BVC80_1831g39 | BVC80_1837g79 | A0A200R767 | A0A200R3I9 | Protein kinase domain. | Uncharacterized protein. | 0.469 |
BVC80_1837g19 | BVC80_1707g146 | A0A200R3C6 | A0A200Q6B5 | RNA recognition motif domain. | Small nuclear ribonucleoprotein G. | 0.981 |
BVC80_1837g19 | BVC80_1837g79 | A0A200R3C6 | A0A200R3I9 | RNA recognition motif domain. | Uncharacterized protein. | 0.425 |
BVC80_1837g19 | BVC80_243g55 | A0A200R3C6 | A0A200R184 | RNA recognition motif domain. | Small nuclear ribonucleoprotein-associated protein. | 0.980 |
BVC80_1837g19 | BVC80_8289g2 | A0A200R3C6 | A0A200Q0F6 | RNA recognition motif domain. | G-patch domain. | 0.817 |
BVC80_1837g19 | BVC80_8745g6 | A0A200R3C6 | A0A200QG22 | RNA recognition motif domain. | Small nuclear ribonucleoprotein E. | 0.980 |
page 1 of 4