STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_1835g1Uncharacterized protein. (122 aa)    
Predicted Functional Partners:
BVC80_1769g79
Uncharacterized protein.
  
 
 0.881
BVC80_1605g41
Ribosomal protein L6.
   
 
 0.831
BVC80_1183g78
Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.774
BVC80_8319g5
Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.
   
 
 0.764
BVC80_8319g4
Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.
   
 
 0.764
BVC80_8319g2
Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.
   
 
 0.764
BVC80_1211g77
Ribosomal protein PSRP-3/Ycf65.
   
 
 0.763
BVC80_1719g19
Ribosomal protein S30Ae/sigma 54 modulation protein.
    
 
 0.760
BVC80_8917g30
Ribosomal protein L24; Belongs to the universal ribosomal protein uL24 family.
   
 
 0.755
BVC80_8919g30
RNA recognition motif domain.
    
 
 0.751
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.