Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BVC80_1741g31 | BVC80_1751g60 | A0A200QKX1 | A0A200QHL2 | Trigger factor. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.995 |
BVC80_1741g31 | BVC80_1791g41 | A0A200QKX1 | A0A200QPT4 | Trigger factor. | Ribosomal protein S6. | 0.999 |
BVC80_1741g31 | BVC80_1835g28 | A0A200QKX1 | A0A200R4N6 | Trigger factor. | Ribosomal protein L4/L1e. | 0.986 |
BVC80_1741g31 | BVC80_1837g310 | A0A200QKX1 | A0A200R435 | Trigger factor. | Ribosomal protein L27. | 0.982 |
BVC80_1741g31 | BVC80_8893g45 | A0A200QKX1 | A0A200Q420 | Trigger factor. | Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.996 |
BVC80_1741g31 | BVC80_8917g30 | A0A200QKX1 | A0A200QRR4 | Trigger factor. | Ribosomal protein L24; Belongs to the universal ribosomal protein uL24 family. | 0.985 |
BVC80_1741g31 | BVC80_8967g35 | A0A200QKX1 | A0A200PM09 | Trigger factor. | Ribosomal protein S16. | 0.999 |
BVC80_1741g31 | BVC80_9045g56 | A0A200QKX1 | A0A200R3B4 | Trigger factor. | Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. | 0.995 |
BVC80_1741g31 | BVC80_9081g71 | A0A200QKX1 | A0A200PRT2 | Trigger factor. | Ribosomal protein L28. | 0.988 |
BVC80_1741g31 | BVC80_9099g100 | A0A200QKX1 | A0A200PVP8 | Trigger factor. | Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. | 0.998 |
BVC80_1751g60 | BVC80_1741g31 | A0A200QHL2 | A0A200QKX1 | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | Trigger factor. | 0.995 |
BVC80_1751g60 | BVC80_1791g41 | A0A200QHL2 | A0A200QPT4 | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | Ribosomal protein S6. | 0.999 |
BVC80_1751g60 | BVC80_1835g28 | A0A200QHL2 | A0A200R4N6 | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | Ribosomal protein L4/L1e. | 0.991 |
BVC80_1751g60 | BVC80_1837g310 | A0A200QHL2 | A0A200R435 | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | Ribosomal protein L27. | 0.997 |
BVC80_1751g60 | BVC80_8893g45 | A0A200QHL2 | A0A200Q420 | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.997 |
BVC80_1751g60 | BVC80_8917g30 | A0A200QHL2 | A0A200QRR4 | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | Ribosomal protein L24; Belongs to the universal ribosomal protein uL24 family. | 0.995 |
BVC80_1751g60 | BVC80_8967g35 | A0A200QHL2 | A0A200PM09 | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | Ribosomal protein S16. | 0.999 |
BVC80_1751g60 | BVC80_9045g56 | A0A200QHL2 | A0A200R3B4 | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. | 0.999 |
BVC80_1751g60 | BVC80_9081g71 | A0A200QHL2 | A0A200PRT2 | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | Ribosomal protein L28. | 0.997 |
BVC80_1751g60 | BVC80_9099g100 | A0A200QHL2 | A0A200PVP8 | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. | 0.993 |
page 1 of 6