STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_1835g378Shugoshin. (413 aa)    
Predicted Functional Partners:
BVC80_909g5
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.895
BVC80_157g82
Cyclic nucleotide-binding domain.
    
 0.703
BVC80_7755g3
Zinc finger protein.
    
  0.658
BVC80_1395g90
SNF2-related.
    
 0.651
BVC80_437g10
ARID/BRIGHT DNA-binding domain.
    
 0.619
BVC80_8463g3
ARID/BRIGHT DNA-binding domain.
    
 0.619
BVC80_8809g29
ARID/BRIGHT DNA-binding domain.
    
 0.619
BVC80_1543g215
ARID/BRIGHT DNA-binding domain.
    
 0.619
BVC80_1721g32
Uncharacterized protein.
  
 
   0.576
BVC80_9041g8
Transcription factor IIIC.
    
 0.562
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.