STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_1835g404Glycoside hydrolase. (540 aa)    
Predicted Functional Partners:
BVC80_7209g2
Glyco_hyd_65N_2 domain-containing protein.
 
 
 0.960
BVC80_1065g137
Lipase.
   
 
 0.910
BVC80_1065g138
Lipase.
   
 
 0.910
BVC80_8973g21
Glycoside hydrolase.
  
  
 
0.889
BVC80_1065g130
Uridine kinase; Belongs to the uridine kinase family.
   
 
 0.645
BVC80_887g121
Alpha-galactosidase.
   
 
 0.645
BVC80_441g256
Glycoside hydrolase.
 
   
 0.548
BVC80_9087g19
Alpha-galactosidase.
   
 
 0.494
BVC80_645g100
Alpha-galactosidase.
   
 
 0.494
BVC80_645g71
Alpha-galactosidase.
   
 
 0.494
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.