STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_1835g535Uncharacterized protein family Cys-rich. (240 aa)    
Predicted Functional Partners:
BVC80_9073g110
Uncharacterized protein.
  
     0.491
BVC80_1835g222
Uncharacterized protein.
  
     0.463
BVC80_9031g16
Uncharacterized protein.
  
     0.456
BVC80_1831g16
Uncharacterized protein.
  
     0.447
BVC80_1395g109
Uncharacterized protein.
  
     0.435
BVC80_1321g66
Uncharacterized protein.
  
     0.429
BVC80_479g70
Homeobox domain.
      
 0.418
BVC80_857g45
Uncharacterized protein.
  
     0.415
BVC80_53g5
Phytosulfokine.
  
     0.411
BVC80_8965g19
Uncharacterized protein.
  
     0.406
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.