STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_1833g133Glycoside hydrolase; Belongs to the glycosyl hydrolase 31 family. (991 aa)    
Predicted Functional Partners:
BVC80_8041g11
Glucosidase 2 subunit beta.
 
 
 0.924
BVC80_1741g75
Glucosidase II beta subunit.
   
 0.924
BVC80_1837g349
Glycoside hydrolase.
   
 0.875
BVC80_8523g13
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
   
 
 0.828
BVC80_9101g268
Calreticulin/calnexin.
    
 0.783
BVC80_1837g135
Calreticulin/calnexin.
    
 0.783
BVC80_9093g9
Carbohydrate binding module family 20.
  
 
 0.773
BVC80_1769g101
Carbohydrate binding module family 20.
    
 0.749
BVC80_9041g61
4-alpha-glucanotransferase.
    
 0.749
BVC80_6711g1
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
    
 0.721
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.