STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_1831g307SANT/Myb domain. (93 aa)    
Predicted Functional Partners:
BVC80_1297g29
Uncharacterized protein.
    
 0.618
BVC80_1459g6
Heat shock protein 70 family.
   
 0.559
BVC80_887g26
Ubiquitin domain.
    
 0.519
BVC80_9081g99
JAB/MPN domain.
   
  0.518
BVC80_1745g43
TATA-binding protein interacting (TIP20).
   
  0.515
BVC80_469g7
Interferon-related developmental regulator.
    
 0.510
BVC80_8915g21
Interferon-related developmental regulator.
    
 0.510
BVC80_9051g57
BTB/POZ-like.
   
 
  0.503
BVC80_1501g13
JAB/MPN domain.
   
  0.497
BVC80_1715g51
Heat shock protein 70 family.
   
 0.490
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.