STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_521g90Uncharacterized protein. (71 aa)    
Predicted Functional Partners:
BVC80_1759g16
Uncharacterized protein.
  
   0.957
BVC80_1805g81
Complex 1 LYR protein; Belongs to the complex I LYR family.
   
   0.947
BVC80_1117g16
4Fe-4S binding domain.
    
  0.920
BVC80_8923g27
Uncharacterized protein.
   
   0.917
BVC80_8741g2
NADH-ubiquinone oxidoreductase.
   
   0.917
BVC80_8879g19
Uncharacterized protein.
   
   0.913
BVC80_1787g188
Uncharacterized protein.
   
   0.912
BVC80_1833g136
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
   0.910
BVC80_1837g320
Uncharacterized protein.
   
   0.908
BVC80_9039g39
Uncharacterized protein.
   
   0.907
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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