STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_521g120Protein kinase domain. (414 aa)    
Predicted Functional Partners:
BVC80_8683g15
Zinc finger protein.
   
 0.580
BVC80_1831g39
Protein kinase domain.
    
0.535
BVC80_157g82
Cyclic nucleotide-binding domain.
    
 0.526
BVC80_1381g13
U box domain.
    
  0.525
BVC80_1065g163
Phox/Bem1p.
   
 0.519
BVC80_27g2
Ubiquitin carboxyl-terminal hydrolases family 2; Belongs to the peptidase C19 family.
    
  0.495
BVC80_1835g283
Protein kinase domain.
  
 
 
0.474
BVC80_157g132
Protein kinase domain.
  
  0.472
BVC80_9057g12
Protein kinase domain.
  
 
 
0.470
BVC80_9033g35
Protein kinase domain.
  
 
 
0.457
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.