STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_1667g37UBX. (399 aa)    
Predicted Functional Partners:
BVC80_9073g64
PUG domain.
    
 0.984
BVC80_1749g36
PUG domain.
    
 0.983
BVC80_1511g9
UBX.
    
 0.979
BVC80_1787g248
UBX.
    
 0.979
BVC80_8987g15
Ovarian tumor.
   
 
 0.976
BVC80_1731g54
CDC48.
   
 0.974
BVC80_1835g427
CDC48.
   
 0.974
BVC80_887g60
CDC48.
   
 0.974
BVC80_1659g18
UBX domain-containing protein.
    
 
 0.969
BVC80_1065g20
UBX.
    
 0.968
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.