STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_887g62Chromosome segregation protein Spc25. (314 aa)    
Predicted Functional Partners:
BVC80_7321g1
Kinetochore protein Nuf2.
   
 0.999
BVC80_1065g14
DNA-binding HORMA.
   
 
 0.975
BVC80_9089g48
cAMP response element binding (CREB) protein.
    
 0.943
BVC80_1543g35
Basic-leucine zipper domain.
    
 0.943
BVC80_881g37
Basic-leucine zipper domain.
    
 0.943
BVC80_7287g3
Protein kinase domain.
   
 
 0.933
BVC80_7545g3
Nuclear condensin complex subunit 3.
   
  
 0.912
BVC80_1769g4
CDC45 family.
   
    0.907
BVC80_1183g75
Protein kinase domain.
   
 0.880
BVC80_989g31
Mad3/BUB1 homology region 1.
   
 0.880
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.