STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BVC80_887g90Reticulon. (1800 aa)    
Predicted Functional Partners:
BVC80_1651g86
Glycosyl transferase; Belongs to the glycosyltransferase 29 family.
      
 0.483
BVC80_1719g24
Hexosyltransferase; Belongs to the glycosyltransferase 31 family.
      
 0.483
BVC80_8869g12
Glycosyl transferase.
      
 0.482
BVC80_1169g24
Galectin.
      
 0.481
BVC80_1373g5
Hexosyltransferase; Belongs to the glycosyltransferase 31 family.
      
 0.481
BVC80_7921g5
Glycosyl transferase.
      
 0.448
BVC80_8941g40
Protein LIN37.
  
     0.442
BVC80_1543g132
Galectin.
      
 0.437
BVC80_337g1
Hexosyltransferase; Belongs to the glycosyltransferase 31 family.
      
 0.420
BVC80_633g22
Glycosyltransferase.
      
 0.416
Your Current Organism:
Macleaya cordata
NCBI taxonomy Id: 56857
Other names: M. cordata, Macleaya cordata (Willd.) R.Br.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.