Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000406125_00483 | GCA_000406125_00878 | GCA_000406125_00483 | GCA_000406125_00878 | Unannotated protein. | Unannotated protein; Belongs to the DegT/DnrJ/EryC1 family. | 0.938 |
GCA_000406125_00483 | GCA_000406125_00879 | GCA_000406125_00483 | GCA_000406125_00879 | Unannotated protein. | Unannotated protein; Belongs to the DegT/DnrJ/EryC1 family. | 0.940 |
GCA_000406125_00483 | GCA_000406125_00880 | GCA_000406125_00483 | GCA_000406125_00880 | Unannotated protein. | Unannotated protein; Belongs to the DegT/DnrJ/EryC1 family. | 0.938 |
GCA_000406125_00483 | arnA | GCA_000406125_00483 | GCA_000406125_03904 | Unannotated protein. | Unannotated protein; Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto- arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4- amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido- arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; In the N-terminal section; belongs to the Fmt family. UDP- L-Ara4N formyltransferase subfamily. | 0.674 |
GCA_000406125_00483 | arnB | GCA_000406125_00483 | GCA_000406125_03902 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of UDP-4-keto-arabinose (UDP-Ara4O) to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; Belongs to the DegT/DnrJ/EryC1 family. ArnB subfamily. | 0.938 |
GCA_000406125_00483 | wcaJ | GCA_000406125_00483 | GCA_000406125_01354 | Unannotated protein. | Unannotated protein. | 0.846 |
GCA_000406125_00876 | GCA_000406125_00877 | GCA_000406125_00876 | GCA_000406125_00877 | Unannotated protein. | Unannotated protein. | 0.820 |
GCA_000406125_00876 | GCA_000406125_00878 | GCA_000406125_00876 | GCA_000406125_00878 | Unannotated protein. | Unannotated protein; Belongs to the DegT/DnrJ/EryC1 family. | 0.760 |
GCA_000406125_00876 | GCA_000406125_00879 | GCA_000406125_00876 | GCA_000406125_00879 | Unannotated protein. | Unannotated protein; Belongs to the DegT/DnrJ/EryC1 family. | 0.760 |
GCA_000406125_00876 | GCA_000406125_00880 | GCA_000406125_00876 | GCA_000406125_00880 | Unannotated protein. | Unannotated protein; Belongs to the DegT/DnrJ/EryC1 family. | 0.760 |
GCA_000406125_00876 | GCA_000406125_00881 | GCA_000406125_00876 | GCA_000406125_00881 | Unannotated protein. | Unannotated protein. | 0.637 |
GCA_000406125_00876 | mtnP | GCA_000406125_00876 | GCA_000406125_00874 | Unannotated protein. | Unannotated protein; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily. | 0.839 |
GCA_000406125_00877 | GCA_000406125_00876 | GCA_000406125_00877 | GCA_000406125_00876 | Unannotated protein. | Unannotated protein. | 0.820 |
GCA_000406125_00877 | GCA_000406125_00878 | GCA_000406125_00877 | GCA_000406125_00878 | Unannotated protein. | Unannotated protein; Belongs to the DegT/DnrJ/EryC1 family. | 0.773 |
GCA_000406125_00877 | GCA_000406125_00879 | GCA_000406125_00877 | GCA_000406125_00879 | Unannotated protein. | Unannotated protein; Belongs to the DegT/DnrJ/EryC1 family. | 0.773 |
GCA_000406125_00877 | GCA_000406125_00880 | GCA_000406125_00877 | GCA_000406125_00880 | Unannotated protein. | Unannotated protein; Belongs to the DegT/DnrJ/EryC1 family. | 0.773 |
GCA_000406125_00877 | GCA_000406125_00881 | GCA_000406125_00877 | GCA_000406125_00881 | Unannotated protein. | Unannotated protein. | 0.660 |
GCA_000406125_00877 | mtnP | GCA_000406125_00877 | GCA_000406125_00874 | Unannotated protein. | Unannotated protein; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily. | 0.757 |
GCA_000406125_00878 | GCA_000406125_00483 | GCA_000406125_00878 | GCA_000406125_00483 | Unannotated protein; Belongs to the DegT/DnrJ/EryC1 family. | Unannotated protein. | 0.938 |
GCA_000406125_00878 | GCA_000406125_00876 | GCA_000406125_00878 | GCA_000406125_00876 | Unannotated protein; Belongs to the DegT/DnrJ/EryC1 family. | Unannotated protein. | 0.760 |
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