STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000406125_01150Unannotated protein. (211 aa)    
Predicted Functional Partners:
GCA_000406125_01149
Unannotated protein.
     0.994
GCA_000406125_01152
Unannotated protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  0.969
GCA_000406125_01151
Unannotated protein.
 
  0.963
GCA_000406125_01065
Unannotated protein.
 0.885
GCA_000406125_01389
Unannotated protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  0.867
mdtA
Unannotated protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  0.785
GCA_000406125_00821
Unannotated protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.700
GCA_000406125_00712
Unannotated protein.
 
  0.661
GCA_000406125_01063
Unannotated protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.606
GCA_000406125_03796
Unannotated protein.
 
  0.599
Your Current Organism:
Dickeya sp. NCPPB569
NCBI taxonomy Id: 568768
Other names: D. sp. NCPPB 569, Dickeya sp. NCPPB 569
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.