Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000406125_02106 | GCA_000406125_02107 | GCA_000406125_02106 | GCA_000406125_02107 | Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Unannotated protein. | 0.994 |
GCA_000406125_02106 | GCA_000406125_02662 | GCA_000406125_02106 | GCA_000406125_02662 | Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.932 |
GCA_000406125_02106 | GCA_000406125_02663 | GCA_000406125_02106 | GCA_000406125_02663 | Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Unannotated protein. | 0.963 |
GCA_000406125_02106 | cobA | GCA_000406125_02106 | GCA_000406125_02661 | Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Unannotated protein; Belongs to the precorrin methyltransferase family. | 0.410 |
GCA_000406125_02106 | cobA-2 | GCA_000406125_02106 | GCA_000406125_03152 | Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Unannotated protein; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | 0.410 |
GCA_000406125_02106 | hcp | GCA_000406125_02106 | GCA_000406125_01701 | Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Unannotated protein; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O. | 0.550 |
GCA_000406125_02106 | narH | GCA_000406125_02106 | GCA_000406125_02105 | Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Unannotated protein. | 0.999 |
GCA_000406125_02106 | narI | GCA_000406125_02106 | GCA_000406125_02103 | Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Unannotated protein. | 0.999 |
GCA_000406125_02106 | nirD | GCA_000406125_02106 | GCA_000406125_02664 | Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Unannotated protein; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.996 |
GCA_000406125_02107 | GCA_000406125_02106 | GCA_000406125_02107 | GCA_000406125_02106 | Unannotated protein. | Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.994 |
GCA_000406125_02107 | GCA_000406125_02663 | GCA_000406125_02107 | GCA_000406125_02663 | Unannotated protein. | Unannotated protein. | 0.963 |
GCA_000406125_02107 | cobA | GCA_000406125_02107 | GCA_000406125_02661 | Unannotated protein. | Unannotated protein; Belongs to the precorrin methyltransferase family. | 0.410 |
GCA_000406125_02107 | cobA-2 | GCA_000406125_02107 | GCA_000406125_03152 | Unannotated protein. | Unannotated protein; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | 0.410 |
GCA_000406125_02107 | hcp | GCA_000406125_02107 | GCA_000406125_01701 | Unannotated protein. | Unannotated protein; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O. | 0.550 |
GCA_000406125_02107 | narH | GCA_000406125_02107 | GCA_000406125_02105 | Unannotated protein. | Unannotated protein. | 0.997 |
GCA_000406125_02107 | narI | GCA_000406125_02107 | GCA_000406125_02103 | Unannotated protein. | Unannotated protein. | 0.997 |
GCA_000406125_02107 | nirD | GCA_000406125_02107 | GCA_000406125_02664 | Unannotated protein. | Unannotated protein; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.963 |
GCA_000406125_02662 | GCA_000406125_02106 | GCA_000406125_02662 | GCA_000406125_02106 | Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.932 |
GCA_000406125_02662 | GCA_000406125_02663 | GCA_000406125_02662 | GCA_000406125_02663 | Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Unannotated protein. | 0.992 |
GCA_000406125_02662 | cobA | GCA_000406125_02662 | GCA_000406125_02661 | Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Unannotated protein; Belongs to the precorrin methyltransferase family. | 0.831 |
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