STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
qseGUnannotated protein. (261 aa)    
Predicted Functional Partners:
GCA_000406125_02957
Unannotated protein.
 
   
 0.859
glrR
Unannotated protein.
     
 0.794
panM
Unannotated protein; Controls both the activation and catalytic activity of PanD in a coenzyme A (CoA)-dependent fashion; Belongs to the PanZ/PanM family.
  
     0.768
GCA_000406125_02329
Unannotated protein.
  
     0.766
tomB
Unannotated protein.
  
     0.763
uspB
Unannotated protein.
  
     0.757
GCA_000406125_00140
Unannotated protein.
  
     0.757
flgM
Unannotated protein.
  
     0.756
GCA_000406125_01819
Unannotated protein.
  
     0.745
pspG
Unannotated protein.
  
     0.745
Your Current Organism:
Dickeya sp. NCPPB569
NCBI taxonomy Id: 568768
Other names: D. sp. NCPPB 569, Dickeya sp. NCPPB 569
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.