STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tyrAUnannotated protein. (373 aa)    
Predicted Functional Partners:
pheA
Unannotated protein.
 
  
  0.988
GCA_000406125_00443
Unannotated protein; Catalyzes the Claisen rearrangement of chorismate to prephenate.
     
  0.947
hisC
Unannotated protein; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
  
  
  0.932
GCA_000406125_02299
Unannotated protein.
     
  0.923
GCA_000406125_03281
Unannotated protein.
     
  0.923
aroC
Unannotated protein; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
  
  
  0.920
GCA_000406125_01872
Unannotated protein.
  
  
  0.917
GCA_000406125_03278
Unannotated protein.
     
  0.908
GCA_000406125_01871
Unannotated protein.
     
  0.900
ubiC
Unannotated protein; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway.
     
  0.800
Your Current Organism:
Dickeya sp. NCPPB569
NCBI taxonomy Id: 568768
Other names: D. sp. NCPPB 569, Dickeya sp. NCPPB 569
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.