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Acin_1012 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_1012" - Polysaccharide transporter in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_1012Polysaccharide transporter (481 aa)    
Predicted Functional Partners:
Acin_0990
Exopolysaccharide biosynthesis protein (239 aa)
 
     
  0.802
Acin_0989
UDP-galactopyranose mutase (365 aa)
 
 
  0.799
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase (208 aa)
 
   
  0.672
rfbD
dTDP-4-dehydrorhamnose reductase (309 aa)
 
   
  0.579
Acin_0484
Undecaprenyl-phosphate galactose phosphotransferase (456 aa)
 
   
  0.561
Acin_0991
Hypothetical protein (320 aa)
 
          0.518
Acin_1011
Ss-1,4-galactosyltransferase (337 aa)
 
   
  0.517
Acin_0996
Hypothetical protein (260 aa)
 
          0.495
Acin_0067
Hypothetical protein (397 aa)
   
 
  0.488
wbpO
Nucleotide sugar dehydrogenase (443 aa)
   
 
  0.476
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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