Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Acin_1139 | Acin_1140 | Acin_1139 | Acin_1140 | Cell division protein ftsK/spoIIIE; COG1674. | Conserved hypothetical protein; COG1426. | 0.818 |
Acin_1139 | Acin_1145 | Acin_1139 | Acin_1145 | Cell division protein ftsK/spoIIIE; COG1674. | Aluminum resistance protein; COG4100. | 0.675 |
Acin_1139 | cinA | Acin_1139 | Acin_1142 | Cell division protein ftsK/spoIIIE; COG1674. | Competence/damage-inducible protein cinA; COG1546; Belongs to the CinA family. | 0.796 |
Acin_1139 | hflX | Acin_1139 | Acin_1144 | Cell division protein ftsK/spoIIIE; COG1674. | Small GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. | 0.704 |
Acin_1139 | rimO | Acin_1139 | Acin_1141 | Cell division protein ftsK/spoIIIE; COG1674. | Conserved hypothetical protein; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | 0.732 |
Acin_1140 | Acin_1139 | Acin_1140 | Acin_1139 | Conserved hypothetical protein; COG1426. | Cell division protein ftsK/spoIIIE; COG1674. | 0.818 |
Acin_1140 | Acin_1145 | Acin_1140 | Acin_1145 | Conserved hypothetical protein; COG1426. | Aluminum resistance protein; COG4100. | 0.677 |
Acin_1140 | cinA | Acin_1140 | Acin_1142 | Conserved hypothetical protein; COG1426. | Competence/damage-inducible protein cinA; COG1546; Belongs to the CinA family. | 0.853 |
Acin_1140 | hflX | Acin_1140 | Acin_1144 | Conserved hypothetical protein; COG1426. | Small GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. | 0.702 |
Acin_1140 | rimO | Acin_1140 | Acin_1141 | Conserved hypothetical protein; COG1426. | Conserved hypothetical protein; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | 0.732 |
Acin_1145 | Acin_1139 | Acin_1145 | Acin_1139 | Aluminum resistance protein; COG4100. | Cell division protein ftsK/spoIIIE; COG1674. | 0.675 |
Acin_1145 | Acin_1140 | Acin_1145 | Acin_1140 | Aluminum resistance protein; COG4100. | Conserved hypothetical protein; COG1426. | 0.677 |
Acin_1145 | cinA | Acin_1145 | Acin_1142 | Aluminum resistance protein; COG4100. | Competence/damage-inducible protein cinA; COG1546; Belongs to the CinA family. | 0.777 |
Acin_1145 | hflX | Acin_1145 | Acin_1144 | Aluminum resistance protein; COG4100. | Small GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. | 0.841 |
Acin_1145 | rimO | Acin_1145 | Acin_1141 | Aluminum resistance protein; COG4100. | Conserved hypothetical protein; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | 0.742 |
cinA | Acin_1139 | Acin_1142 | Acin_1139 | Competence/damage-inducible protein cinA; COG1546; Belongs to the CinA family. | Cell division protein ftsK/spoIIIE; COG1674. | 0.796 |
cinA | Acin_1140 | Acin_1142 | Acin_1140 | Competence/damage-inducible protein cinA; COG1546; Belongs to the CinA family. | Conserved hypothetical protein; COG1426. | 0.853 |
cinA | Acin_1145 | Acin_1142 | Acin_1145 | Competence/damage-inducible protein cinA; COG1546; Belongs to the CinA family. | Aluminum resistance protein; COG4100. | 0.777 |
cinA | hflX | Acin_1142 | Acin_1144 | Competence/damage-inducible protein cinA; COG1546; Belongs to the CinA family. | Small GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. | 0.846 |
cinA | nadD | Acin_1142 | Acin_2300 | Competence/damage-inducible protein cinA; COG1546; Belongs to the CinA family. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.959 |
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