STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_1354Conserved hypothetical protein; NOG140500. (149 aa)    
Predicted Functional Partners:
Acin_1356
Diacylglycerol kinase; NOG47100.
 
     0.864
Acin_1355
Conserved hypothetical protein; COG0553.
 
    0.816
Acin_1350
Conserved hypothetical protein.
 
    0.733
Acin_1983
Conserved hypothetical protein.
 
    0.725
Acin_1365
Conserved hypothetical protein; NOG73630.
 
     0.690
Acin_1333
Phage tail tape measure protein.
  
     0.660
Acin_1964
Phage tail tape measure protein.
  
     0.648
Acin_0293
Conserved hypothetical protein; COG2172.
  
 
 0.633
rpoB
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.627
Acin_2001
Conserved hypothetical protein; NOG73630.
 
     0.624
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini RyC-MR95, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.