Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Acin_1427 | Acin_1428 | Acin_1427 | Acin_1428 | Conserved hypothetical protein; COG3394. | Transcriptional regulator. | 0.537 |
Acin_1427 | Acin_1429 | Acin_1427 | Acin_1429 | Conserved hypothetical protein; COG3394. | Methylated DNA-protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | 0.500 |
Acin_1427 | Acin_2181 | Acin_1427 | Acin_2181 | Conserved hypothetical protein; COG3394. | Glycosyl transferase. | 0.440 |
Acin_1427 | fruA | Acin_1427 | Acin_1425 | Conserved hypothetical protein; COG3394. | PTS system protein; COG1762. | 0.861 |
Acin_1427 | fruK | Acin_1427 | Acin_1426 | Conserved hypothetical protein; COG3394. | 1-phosphofructokinase; COG1105; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | 0.776 |
Acin_1428 | Acin_1427 | Acin_1428 | Acin_1427 | Transcriptional regulator. | Conserved hypothetical protein; COG3394. | 0.537 |
Acin_1428 | Acin_1429 | Acin_1428 | Acin_1429 | Transcriptional regulator. | Methylated DNA-protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | 0.930 |
Acin_1428 | fruA | Acin_1428 | Acin_1425 | Transcriptional regulator. | PTS system protein; COG1762. | 0.564 |
Acin_1428 | fruK | Acin_1428 | Acin_1426 | Transcriptional regulator. | 1-phosphofructokinase; COG1105; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | 0.537 |
Acin_1429 | Acin_1427 | Acin_1429 | Acin_1427 | Methylated DNA-protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | Conserved hypothetical protein; COG3394. | 0.500 |
Acin_1429 | Acin_1428 | Acin_1429 | Acin_1428 | Methylated DNA-protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | Transcriptional regulator. | 0.930 |
Acin_1429 | fruA | Acin_1429 | Acin_1425 | Methylated DNA-protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | PTS system protein; COG1762. | 0.502 |
Acin_1429 | fruK | Acin_1429 | Acin_1426 | Methylated DNA-protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | 1-phosphofructokinase; COG1105; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | 0.500 |
Acin_2181 | Acin_1427 | Acin_2181 | Acin_1427 | Glycosyl transferase. | Conserved hypothetical protein; COG3394. | 0.440 |
fruA | Acin_1427 | Acin_1425 | Acin_1427 | PTS system protein; COG1762. | Conserved hypothetical protein; COG3394. | 0.861 |
fruA | Acin_1428 | Acin_1425 | Acin_1428 | PTS system protein; COG1762. | Transcriptional regulator. | 0.564 |
fruA | Acin_1429 | Acin_1425 | Acin_1429 | PTS system protein; COG1762. | Methylated DNA-protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. | 0.502 |
fruA | fruK | Acin_1425 | Acin_1426 | PTS system protein; COG1762. | 1-phosphofructokinase; COG1105; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | 0.999 |
fruK | Acin_1427 | Acin_1426 | Acin_1427 | 1-phosphofructokinase; COG1105; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | Conserved hypothetical protein; COG3394. | 0.776 |
fruK | Acin_1428 | Acin_1426 | Acin_1428 | 1-phosphofructokinase; COG1105; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | Transcriptional regulator. | 0.537 |
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