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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_1663FAD dependent oxidoreductase; COG2509. (462 aa)    
Predicted Functional Partners:
Acin_1664
Beta-lactamase class A-like protein.
       0.782
Acin_1665
Conserved hypothetical protein.
       0.782
Acin_1662
Hypothetical protein.
       0.773
dnaE
DNA polymerase III; COG0587.
       0.631
Acin_1666
Hypothetical protein.
       0.569
Acin_1660
Hypothetical protein.
       0.554
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini RyC-MR95, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.