STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_1709Peptidase M23B. (383 aa)    
Predicted Functional Partners:
ftsX
Cell division protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 
 0.971
ftsE
Cell division ATP-binding protein ftsE; Part of the ABC transporter FtsEX involved in cellular division.
 
   
 0.866
Acin_1708
Carboxyl-terminal protease; Belongs to the peptidase S41A family.
 
    0.854
Acin_1712
Conserved hypothetical protein.
 
     0.833
Acin_1713
Conserved hypothetical protein.
 
     0.784
arcB
Two-component system sensor histidine kinase and response regulator.
     
 0.737
prfB
Peptide chain release factor; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
       0.705
Acin_1715
Hypothetical protein.
       0.685
nfo
Apurinic endonuclease apn1; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.
       0.677
mrcA
Penicillin-binding protein; COG0744.
  
     0.676
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini RyC-MR95, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.