STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_1882Hypothetical protein; NOG14263. (325 aa)    
Predicted Functional Partners:
Acin_1880
Conserved hypothetical protein; NOG17480.
 
     0.942
Acin_1878
DNA-directed DNA polymerase; NOG11122.
 
     0.938
Acin_1883
rRNA biogenesis protein rrp5, putative.
     0.842
Acin_1361
DNA polymerase I; NOG11122.
 
     0.777
Acin_1363
Conserved hypothetical protein; NOG17480.
 
     0.777
Acin_1934
VRR-NUC domain protein; NOG47100.
 
     0.777
Acin_1992
Diacylglycerol kinase; NOG47100.
 
     0.777
Acin_1997
DNA polymerase I; NOG11122.
 
     0.777
Acin_1999
Conserved hypothetical protein; NOG17480.
 
     0.777
Acin_1355
Conserved hypothetical protein; COG0553.
 
     0.774
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini RyC-MR95, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.