STRINGSTRING
Acin_2001 protein (Acidaminococcus intestini) - STRING interaction network
"Acin_2001" - Hypothetical protein in Acidaminococcus intestini
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_2001Hypothetical protein (103 aa)    
Predicted Functional Partners:
Acin_1999
Hypothetical protein (196 aa)
 
          0.966
Acin_2000
Hypothetical protein (369 aa)
 
          0.943
Acin_2002
Hypothetical protein (56 aa)
              0.859
Acin_1997
DNA polymerase I (662 aa)
 
          0.823
Acin_1363
Hypothetical protein (188 aa)
 
          0.772
Acin_1880
Hypothetical protein (187 aa)
 
          0.764
Acin_1931
Hypothetical protein (144 aa)
 
          0.740
Acin_1990
Hypothetical protein (145 aa)
 
          0.723
Acin_1878
DNA-directed DNA polymerase (681 aa)
 
          0.692
Acin_1354
Hypothetical protein (149 aa)
 
          0.686
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini, A. intestini RyC-MR95, Acidaminococcus intestini, Acidaminococcus intestini Jumas-Bilak et al. 2007, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95, Acidaminococcus sp. ADV 255.99
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