STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Acin_2100Conserved hypothetical protein. (576 aa)    
Predicted Functional Partners:
Acin_2099
Conserved hypothetical protein; COG0714.
 
  
 0.964
Acin_1902
Hypothetical protein.
  
     0.699
Acin_1223
Conserved hypothetical protein; COG5301.
  
     0.694
Acin_0561
Conserved hypothetical protein.
  
     0.685
Acin_1896
Hypothetical protein.
  
     0.663
Acin_1219
Hypothetical protein.
  
     0.641
Acin_1908
Putative tail length tape measure protein.
  
     0.628
Acin_1664
Beta-lactamase class A-like protein.
  
     0.625
Acin_1901
Hypothetical protein.
  
     0.557
Acin_0728
Conserved hypothetical protein.
  
     0.535
Your Current Organism:
Acidaminococcus intestini
NCBI taxonomy Id: 568816
Other names: A. intestini RyC-MR95, Acidaminococcus intestini RyC-MR95, Acidaminococcus intestini strain RyC-MR95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.