Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Acin_0852 | ppk | Acin_0852 | Acin_2243 | Conserved hypothetical protein. | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.796 |
Acin_0852 | ppx | Acin_0852 | Acin_2244 | Conserved hypothetical protein. | Phosphatase. | 0.709 |
Acin_0852 | ppx-2 | Acin_0852 | Acin_2245 | Conserved hypothetical protein. | Phosphatase. | 0.728 |
Acin_1078 | ppx | Acin_1078 | Acin_2244 | GTP-pyrophosphokinase; COG2357. | Phosphatase. | 0.900 |
Acin_1078 | ppx-2 | Acin_1078 | Acin_2245 | GTP-pyrophosphokinase; COG2357. | Phosphatase. | 0.900 |
Acin_1078 | relA | Acin_1078 | Acin_0642 | GTP-pyrophosphokinase; COG2357. | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.917 |
Acin_2242 | ppk | Acin_2242 | Acin_2243 | Conserved hypothetical protein. | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.504 |
Acin_2242 | ppx | Acin_2242 | Acin_2244 | Conserved hypothetical protein. | Phosphatase. | 0.484 |
Acin_2246 | ppk | Acin_2246 | Acin_2243 | Conserved hypothetical protein; COG0583; Belongs to the LysR transcriptional regulatory family. | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.469 |
Acin_2246 | ppx | Acin_2246 | Acin_2244 | Conserved hypothetical protein; COG0583; Belongs to the LysR transcriptional regulatory family. | Phosphatase. | 0.475 |
Acin_2246 | ppx-2 | Acin_2246 | Acin_2245 | Conserved hypothetical protein; COG0583; Belongs to the LysR transcriptional regulatory family. | Phosphatase. | 0.773 |
ppk | Acin_0852 | Acin_2243 | Acin_0852 | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | Conserved hypothetical protein. | 0.796 |
ppk | Acin_2242 | Acin_2243 | Acin_2242 | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | Conserved hypothetical protein. | 0.504 |
ppk | Acin_2246 | Acin_2243 | Acin_2246 | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | Conserved hypothetical protein; COG0583; Belongs to the LysR transcriptional regulatory family. | 0.469 |
ppk | ppx | Acin_2243 | Acin_2244 | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | Phosphatase. | 0.976 |
ppk | ppx-2 | Acin_2243 | Acin_2245 | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | Phosphatase. | 0.946 |
ppx | Acin_0852 | Acin_2244 | Acin_0852 | Phosphatase. | Conserved hypothetical protein. | 0.709 |
ppx | Acin_1078 | Acin_2244 | Acin_1078 | Phosphatase. | GTP-pyrophosphokinase; COG2357. | 0.900 |
ppx | Acin_2242 | Acin_2244 | Acin_2242 | Phosphatase. | Conserved hypothetical protein. | 0.484 |
ppx | Acin_2246 | Acin_2244 | Acin_2246 | Phosphatase. | Conserved hypothetical protein; COG0583; Belongs to the LysR transcriptional regulatory family. | 0.475 |
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