STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET52819.1Membrane associated serine protease, rhomboid family. (221 aa)    
Predicted Functional Partners:
SEU28868.1
Sec-independent protein translocase protein TatB.
  
 
 0.907
tatA
Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
   
 
 0.881
SET86438.1
N-acetylmuramoyl-L-alanine amidase.
  
   0.862
SET91152.1
N-acetylmuramoyl-L-alanine amidase.
  
   0.862
SET52908.1
PAS domain S-box-containing protein.
  
 
 0.695
SES77408.1
Regulator of protease activity HflC, stomatin/prohibitin superfamily.
   
 0.690
SES77451.1
Regulator of protease activity HflC, stomatin/prohibitin superfamily.
   
 0.690
SEU35015.1
SPFH domain / Band 7 family protein.
   
 0.690
SEU39998.1
Regulator of protease activity HflC, stomatin/prohibitin superfamily.
   
 0.690
SEU43401.1
Regulator of protease activity HflC, stomatin/prohibitin superfamily.
   
 0.690
Your Current Organism:
Nonomuraea wenchangensis
NCBI taxonomy Id: 568860
Other names: CGMCC 4.5598, DSM 45477, N. wenchangensis, Nonomuraea sp. 210417, Nonomuraea wenchangensis Wang et al. 2011, strain 210417
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.