STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET81852.1Hypothetical protein. (38 aa)    
Predicted Functional Partners:
SET81872.1
Hypothetical protein.
       0.773
SET81894.1
Hypothetical protein.
       0.741
SET81919.1
Protein of unknown function.
       0.711
SET81939.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
       0.682
SET81960.1
Hypothetical protein.
       0.682
SET81720.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
       0.532
SET81738.1
DNA binding domain-containing protein, excisionase family.
       0.532
SET81823.1
Hypothetical protein.
       0.532
SET81989.1
Regulatory protein, gntR family.
       0.483
Your Current Organism:
Nonomuraea wenchangensis
NCBI taxonomy Id: 568860
Other names: CGMCC 4.5598, DSM 45477, N. wenchangensis, Nonomuraea sp. 210417, Nonomuraea wenchangensis Wang et al. 2011, strain 210417
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.