STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEU33523.1Predicted metal-dependent hydrolase, TIM-barrel fold. (398 aa)    
Predicted Functional Partners:
SEU32577.1
Hypothetical protein.
  
     0.728
SET84389.1
Hypothetical protein.
  
     0.725
SEU38952.1
Asparagine synthase.
  
     0.722
SET27545.1
Hypothetical protein.
  
     0.720
SEU48112.1
Hypothetical protein.
  
     0.719
SEU16408.1
Hypothetical protein.
  
     0.713
SET20382.1
Transcriptional regulatory protein, C terminal.
  
     0.706
SEU31134.1
FHA domain-containing protein.
  
     0.702
SES81927.1
Hypothetical protein.
  
     0.689
SEU28740.1
Sigma-70, region 4.
  
     0.680
Your Current Organism:
Nonomuraea wenchangensis
NCBI taxonomy Id: 568860
Other names: CGMCC 4.5598, DSM 45477, N. wenchangensis, Nonomuraea sp. 210417, Nonomuraea wenchangensis Wang et al. 2011, strain 210417
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.