STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEU44357.1DNA-binding transcriptional regulator, MarR family. (145 aa)    
Predicted Functional Partners:
SEU44361.1
Pimeloyl-ACP methyl ester carboxylesterase.
 
     0.912
SEU42731.1
Hypothetical protein.
  
     0.658
SEU48259.1
DDE superfamily endonuclease.
  
     0.637
SEU43216.1
Hypothetical protein.
  
    0.578
SET13972.1
Uncharacterized conserved protein, DUF2236 family.
  
     0.545
SEU25230.1
Hypothetical protein.
  
     0.527
SET59561.1
Uncharacterized protein YwqG.
  
     0.506
SET66019.1
Hypothetical protein.
  
  
  0.487
SEU34959.1
Hypothetical protein.
  
     0.460
SEU19745.1
ABC-2 type transport system permease protein.
  
     0.447
Your Current Organism:
Nonomuraea wenchangensis
NCBI taxonomy Id: 568860
Other names: CGMCC 4.5598, DSM 45477, N. wenchangensis, Nonomuraea sp. 210417, Nonomuraea wenchangensis Wang et al. 2011, strain 210417
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.