STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEU47081.1Fluoroquinolone transport system permease protein. (481 aa)    
Predicted Functional Partners:
SEU47080.1
Fluoroquinolone transport system ATP-binding protein.
 
 
  0.962
SEU39083.1
ABC-2 type transport system permease protein.
  
 
  0.895
SES71487.1
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase.
  
     0.723
SET08327.1
ABC-2 type transport system ATP-binding protein.
 
 
  0.575
SEU47079.1
Transcriptional regulator, TetR family.
       0.564
SEU37360.1
ABC-2 type transport system permease protein.
 
 
  0.563
SEU36456.1
Glyoxylase, beta-lactamase superfamily II.
  
     0.542
SES77376.1
ABC-2 family transporter protein.
  
 
  0.502
SES87875.1
ABC-2 type transport system ATP-binding protein.
  
 
  0.502
SES88155.1
ABC-2 type transport system ATP-binding protein.
  
 
  0.502
Your Current Organism:
Nonomuraea wenchangensis
NCBI taxonomy Id: 568860
Other names: CGMCC 4.5598, DSM 45477, N. wenchangensis, Nonomuraea sp. 210417, Nonomuraea wenchangensis Wang et al. 2011, strain 210417
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.