STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEU47741.1Protein of unknown function. (109 aa)    
Predicted Functional Partners:
SEU47745.1
Cytochrome P450.
 
 
  0.947
SEU35681.1
Amino acid adenylation domain-containing protein.
  
 
 0.912
SEU35695.1
Amino acid adenylation domain-containing protein.
  
 
 0.912
SEU47739.1
Roadblock/LC7 domain-containing protein.
 
     0.911
SET98574.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.904
SEU47736.1
Signal transduction histidine kinase.
 
     0.899
SEU47749.1
Cytochrome P450.
 
 
  0.847
SET29431.1
Electron transfer flavoprotein alpha subunit.
  
 0.844
SET29462.1
Electron transfer flavoprotein beta subunit.
  
 0.843
SEU47744.1
Signal recognition particle receptor subunit beta, a GTPase.
       0.796
Your Current Organism:
Nonomuraea wenchangensis
NCBI taxonomy Id: 568860
Other names: CGMCC 4.5598, DSM 45477, N. wenchangensis, Nonomuraea sp. 210417, Nonomuraea wenchangensis Wang et al. 2011, strain 210417
Server load: low (22%) [HD]