Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL13170.1 | SCL13176.1 | GA0070624_0033 | GA0070624_0035 | Hypothetical protein. | [SSU ribosomal protein S18P]-alanine acetyltransferase. | 0.750 |
SCL13170.1 | SCL13181.1 | GA0070624_0033 | GA0070624_0036 | Hypothetical protein. | tRNA threonylcarbamoyl adenosine modification protein YeaZ. | 0.765 |
SCL13170.1 | tsaD | GA0070624_0033 | GA0070624_0034 | Hypothetical protein. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.740 |
SCL13176.1 | SCL13170.1 | GA0070624_0035 | GA0070624_0033 | [SSU ribosomal protein S18P]-alanine acetyltransferase. | Hypothetical protein. | 0.750 |
SCL13176.1 | SCL13181.1 | GA0070624_0035 | GA0070624_0036 | [SSU ribosomal protein S18P]-alanine acetyltransferase. | tRNA threonylcarbamoyl adenosine modification protein YeaZ. | 0.961 |
SCL13176.1 | SCL13189.1 | GA0070624_0035 | GA0070624_0039 | [SSU ribosomal protein S18P]-alanine acetyltransferase. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | 0.596 |
SCL13176.1 | tsaD | GA0070624_0035 | GA0070624_0034 | [SSU ribosomal protein S18P]-alanine acetyltransferase. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.965 |
SCL13181.1 | SCL13170.1 | GA0070624_0036 | GA0070624_0033 | tRNA threonylcarbamoyl adenosine modification protein YeaZ. | Hypothetical protein. | 0.765 |
SCL13181.1 | SCL13176.1 | GA0070624_0036 | GA0070624_0035 | tRNA threonylcarbamoyl adenosine modification protein YeaZ. | [SSU ribosomal protein S18P]-alanine acetyltransferase. | 0.961 |
SCL13181.1 | SCL13189.1 | GA0070624_0036 | GA0070624_0039 | tRNA threonylcarbamoyl adenosine modification protein YeaZ. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | 0.996 |
SCL13181.1 | SCL19025.1 | GA0070624_0036 | GA0070624_1664 | tRNA threonylcarbamoyl adenosine modification protein YeaZ. | BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase. | 0.573 |
SCL13181.1 | SCL19743.1 | GA0070624_0036 | GA0070624_1829 | tRNA threonylcarbamoyl adenosine modification protein YeaZ. | Phospho-glucose isomerase C-terminal SIS domain-containing protein. | 0.555 |
SCL13181.1 | SCL21850.1 | GA0070624_0036 | GA0070624_2410 | tRNA threonylcarbamoyl adenosine modification protein YeaZ. | DNA polymerase. | 0.519 |
SCL13181.1 | SCL25248.1 | GA0070624_0036 | GA0070624_3073 | tRNA threonylcarbamoyl adenosine modification protein YeaZ. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.725 |
SCL13181.1 | murC | GA0070624_0036 | GA0070624_5881 | tRNA threonylcarbamoyl adenosine modification protein YeaZ. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.593 |
SCL13181.1 | tadA | GA0070624_0036 | GA0070624_0626 | tRNA threonylcarbamoyl adenosine modification protein YeaZ. | tRNA(adenine34) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.532 |
SCL13181.1 | tsaD | GA0070624_0036 | GA0070624_0034 | tRNA threonylcarbamoyl adenosine modification protein YeaZ. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.999 |
SCL13189.1 | SCL13176.1 | GA0070624_0039 | GA0070624_0035 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | [SSU ribosomal protein S18P]-alanine acetyltransferase. | 0.596 |
SCL13189.1 | SCL13181.1 | GA0070624_0039 | GA0070624_0036 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | tRNA threonylcarbamoyl adenosine modification protein YeaZ. | 0.996 |
SCL13189.1 | tsaD | GA0070624_0039 | GA0070624_0034 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaE. | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.990 |
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