Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL13627.1 | SCL13634.1 | GA0070624_0189 | GA0070624_0191 | Uncharacterized conserved protein, DUF2252 family. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.462 |
SCL13627.1 | SCL13637.1 | GA0070624_0189 | GA0070624_0192 | Uncharacterized conserved protein, DUF2252 family. | Hypothetical protein. | 0.462 |
SCL13627.1 | nuoB | GA0070624_0189 | GA0070624_0190 | Uncharacterized conserved protein, DUF2252 family. | NADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.756 |
SCL13634.1 | SCL13627.1 | GA0070624_0191 | GA0070624_0189 | RNA polymerase sigma-70 factor, ECF subfamily. | Uncharacterized conserved protein, DUF2252 family. | 0.462 |
SCL13634.1 | SCL13637.1 | GA0070624_0191 | GA0070624_0192 | RNA polymerase sigma-70 factor, ECF subfamily. | Hypothetical protein. | 0.815 |
SCL13634.1 | nuoB | GA0070624_0191 | GA0070624_0190 | RNA polymerase sigma-70 factor, ECF subfamily. | NADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.535 |
SCL13637.1 | SCL13627.1 | GA0070624_0192 | GA0070624_0189 | Hypothetical protein. | Uncharacterized conserved protein, DUF2252 family. | 0.462 |
SCL13637.1 | SCL13634.1 | GA0070624_0192 | GA0070624_0191 | Hypothetical protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.815 |
SCL13637.1 | SCL19060.1 | GA0070624_0192 | GA0070624_1672 | Hypothetical protein. | Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. | 0.416 |
SCL13637.1 | SCL38975.1 | GA0070624_0192 | GA0070624_6404 | Hypothetical protein. | Trehalose 6-phosphatase. | 0.416 |
SCL13637.1 | nhaA | GA0070624_0192 | GA0070624_4360 | Hypothetical protein. | Sodium/proton antiporter, NhaA family; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family. | 0.429 |
SCL13637.1 | nhaA-2 | GA0070624_0192 | GA0070624_4683 | Hypothetical protein. | Sodium/proton antiporter, NhaA family; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family. | 0.429 |
SCL13637.1 | nuoB | GA0070624_0192 | GA0070624_0190 | Hypothetical protein. | NADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.535 |
SCL19060.1 | SCL13637.1 | GA0070624_1672 | GA0070624_0192 | Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. | Hypothetical protein. | 0.416 |
SCL19060.1 | SCL38975.1 | GA0070624_1672 | GA0070624_6404 | Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. | Trehalose 6-phosphatase. | 0.648 |
SCL38975.1 | SCL13637.1 | GA0070624_6404 | GA0070624_0192 | Trehalose 6-phosphatase. | Hypothetical protein. | 0.416 |
SCL38975.1 | SCL19060.1 | GA0070624_6404 | GA0070624_1672 | Trehalose 6-phosphatase. | Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. | 0.648 |
nhaA | SCL13637.1 | GA0070624_4360 | GA0070624_0192 | Sodium/proton antiporter, NhaA family; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family. | Hypothetical protein. | 0.429 |
nhaA-2 | SCL13637.1 | GA0070624_4683 | GA0070624_0192 | Sodium/proton antiporter, NhaA family; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family. | Hypothetical protein. | 0.429 |
nuoB | SCL13627.1 | GA0070624_0190 | GA0070624_0189 | NADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | Uncharacterized conserved protein, DUF2252 family. | 0.756 |
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