Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL16586.1 | SCL16590.1 | GA0070624_1055 | GA0070624_1056 | MaoC like domain-containing protein. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.979 |
SCL16586.1 | SCL16591.1 | GA0070624_1055 | GA0070624_1057 | MaoC like domain-containing protein. | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.955 |
SCL16586.1 | SCL22219.1 | GA0070624_1055 | GA0070624_2489 | MaoC like domain-containing protein. | 3-hydroxyacyl-CoA dehydrogenase. | 0.779 |
SCL16586.1 | SCL28226.1 | GA0070624_1055 | GA0070624_3651 | MaoC like domain-containing protein. | Citrate synthase; Belongs to the citrate synthase family. | 0.407 |
SCL16586.1 | SCL39575.1 | GA0070624_1055 | GA0070624_6614 | MaoC like domain-containing protein. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.662 |
SCL16590.1 | SCL16586.1 | GA0070624_1056 | GA0070624_1055 | 3-oxoacyl-[acyl-carrier protein] reductase. | MaoC like domain-containing protein. | 0.979 |
SCL16590.1 | SCL16591.1 | GA0070624_1056 | GA0070624_1057 | 3-oxoacyl-[acyl-carrier protein] reductase. | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.944 |
SCL16590.1 | SCL22219.1 | GA0070624_1056 | GA0070624_2489 | 3-oxoacyl-[acyl-carrier protein] reductase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.514 |
SCL16591.1 | SCL16586.1 | GA0070624_1057 | GA0070624_1055 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | MaoC like domain-containing protein. | 0.955 |
SCL16591.1 | SCL16590.1 | GA0070624_1057 | GA0070624_1056 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.944 |
SCL16591.1 | SCL16666.1 | GA0070624_1057 | GA0070624_1081 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 3-hydroxyacyl-CoA dehydrogenase. | 0.966 |
SCL16591.1 | SCL19528.1 | GA0070624_1057 | GA0070624_1778 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | acetoacetyl-CoA synthetase. | 0.906 |
SCL16591.1 | SCL22219.1 | GA0070624_1057 | GA0070624_2489 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 3-hydroxyacyl-CoA dehydrogenase. | 0.997 |
SCL16591.1 | SCL28226.1 | GA0070624_1057 | GA0070624_3651 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Citrate synthase; Belongs to the citrate synthase family. | 0.904 |
SCL16591.1 | SCL39282.1 | GA0070624_1057 | GA0070624_6512 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.956 |
SCL16591.1 | SCL39312.1 | GA0070624_1057 | GA0070624_6523 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.962 |
SCL16591.1 | SCL39575.1 | GA0070624_1057 | GA0070624_6614 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.910 |
SCL16591.1 | acsA | GA0070624_1057 | GA0070624_1256 | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.906 |
SCL16666.1 | SCL16591.1 | GA0070624_1081 | GA0070624_1057 | 3-hydroxyacyl-CoA dehydrogenase. | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.966 |
SCL16666.1 | SCL19528.1 | GA0070624_1081 | GA0070624_1778 | 3-hydroxyacyl-CoA dehydrogenase. | acetoacetyl-CoA synthetase. | 0.906 |
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