Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SCL14632.1 | SCL15487.1 | GA0070624_0481 | GA0070624_0734 | A/G-specific DNA-adenine glycosylase. | formamidopyrimidine-DNA glycosylase; Belongs to the FPG family. | 0.514 |
| SCL14632.1 | SCL39495.1 | GA0070624_0481 | GA0070624_6587 | A/G-specific DNA-adenine glycosylase. | Endonuclease-8; Belongs to the FPG family. | 0.430 |
| SCL14632.1 | mutM | GA0070624_0481 | GA0070624_2262 | A/G-specific DNA-adenine glycosylase. | DNA-(apurinic or apyrimidinic site) lyase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.723 |
| SCL14632.1 | nth | GA0070624_0481 | GA0070624_0537 | A/G-specific DNA-adenine glycosylase. | DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.738 |
| SCL14632.1 | polA | GA0070624_0481 | GA0070624_5794 | A/G-specific DNA-adenine glycosylase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.488 |
| SCL14632.1 | recA | GA0070624_0481 | GA0070624_2418 | A/G-specific DNA-adenine glycosylase. | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.512 |
| SCL14632.1 | uvrB | GA0070624_0481 | GA0070624_5786 | A/G-specific DNA-adenine glycosylase. | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.615 |
| SCL14632.1 | uvrC | GA0070624_0481 | GA0070624_5758 | A/G-specific DNA-adenine glycosylase. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.522 |
| SCL15487.1 | SCL14632.1 | GA0070624_0734 | GA0070624_0481 | formamidopyrimidine-DNA glycosylase; Belongs to the FPG family. | A/G-specific DNA-adenine glycosylase. | 0.514 |
| SCL15487.1 | SCL39495.1 | GA0070624_0734 | GA0070624_6587 | formamidopyrimidine-DNA glycosylase; Belongs to the FPG family. | Endonuclease-8; Belongs to the FPG family. | 0.811 |
| SCL15487.1 | mutM | GA0070624_0734 | GA0070624_2262 | formamidopyrimidine-DNA glycosylase; Belongs to the FPG family. | DNA-(apurinic or apyrimidinic site) lyase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.907 |
| SCL15487.1 | nth | GA0070624_0734 | GA0070624_0537 | formamidopyrimidine-DNA glycosylase; Belongs to the FPG family. | DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.458 |
| SCL15487.1 | polA | GA0070624_0734 | GA0070624_5794 | formamidopyrimidine-DNA glycosylase; Belongs to the FPG family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.910 |
| SCL15487.1 | uvrC | GA0070624_0734 | GA0070624_5758 | formamidopyrimidine-DNA glycosylase; Belongs to the FPG family. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.457 |
| SCL21216.1 | mutM | GA0070624_2258 | GA0070624_2262 | Uncharacterized protein. | DNA-(apurinic or apyrimidinic site) lyase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.699 |
| SCL21216.1 | rnc | GA0070624_2258 | GA0070624_2261 | Uncharacterized protein. | RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 0.883 |
| SCL39495.1 | SCL14632.1 | GA0070624_6587 | GA0070624_0481 | Endonuclease-8; Belongs to the FPG family. | A/G-specific DNA-adenine glycosylase. | 0.430 |
| SCL39495.1 | SCL15487.1 | GA0070624_6587 | GA0070624_0734 | Endonuclease-8; Belongs to the FPG family. | formamidopyrimidine-DNA glycosylase; Belongs to the FPG family. | 0.811 |
| SCL39495.1 | mutM | GA0070624_6587 | GA0070624_2262 | Endonuclease-8; Belongs to the FPG family. | DNA-(apurinic or apyrimidinic site) lyase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. | 0.848 |
| SCL39495.1 | nth | GA0070624_6587 | GA0070624_0537 | Endonuclease-8; Belongs to the FPG family. | DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.665 |
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