Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL20419.1 | SCL36611.1 | GA0070624_1991 | GA0070624_5601 | Hypothetical protein. | Tetratricopeptide repeat-containing protein. | 0.585 |
SCL20419.1 | alaS | GA0070624_1991 | GA0070624_3037 | Hypothetical protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.945 |
SCL25056.1 | alaS | GA0070624_3038 | GA0070624_3037 | Putative holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.955 |
SCL25874.1 | SCL36611.1 | GA0070624_3194 | GA0070624_5601 | AAA ATPase domain-containing protein. | Tetratricopeptide repeat-containing protein. | 0.585 |
SCL25874.1 | alaS | GA0070624_3194 | GA0070624_3037 | AAA ATPase domain-containing protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.945 |
SCL26453.1 | SCL29079.1 | GA0070624_3307 | GA0070624_3815 | WD domain, G-beta repeat. | WD-40 repeat-containing protein. | 0.407 |
SCL26453.1 | SCL34865.1 | GA0070624_3307 | GA0070624_5103 | WD domain, G-beta repeat. | WD40 repeat. | 0.759 |
SCL26453.1 | SCL36611.1 | GA0070624_3307 | GA0070624_5601 | WD domain, G-beta repeat. | Tetratricopeptide repeat-containing protein. | 0.632 |
SCL26453.1 | alaS | GA0070624_3307 | GA0070624_3037 | WD domain, G-beta repeat. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.946 |
SCL29079.1 | SCL26453.1 | GA0070624_3815 | GA0070624_3307 | WD-40 repeat-containing protein. | WD domain, G-beta repeat. | 0.407 |
SCL29079.1 | SCL36611.1 | GA0070624_3815 | GA0070624_5601 | WD-40 repeat-containing protein. | Tetratricopeptide repeat-containing protein. | 0.782 |
SCL29079.1 | alaS | GA0070624_3815 | GA0070624_3037 | WD-40 repeat-containing protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.955 |
SCL29840.1 | SCL36611.1 | GA0070624_3961 | GA0070624_5601 | Serine/threonine protein kinase. | Tetratricopeptide repeat-containing protein. | 0.632 |
SCL29840.1 | alaS | GA0070624_3961 | GA0070624_3037 | Serine/threonine protein kinase. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.946 |
SCL33626.1 | SCL36611.1 | GA0070624_4779 | GA0070624_5601 | Hypothetical protein. | Tetratricopeptide repeat-containing protein. | 0.585 |
SCL33626.1 | alaS | GA0070624_4779 | GA0070624_3037 | Hypothetical protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.945 |
SCL34865.1 | SCL26453.1 | GA0070624_5103 | GA0070624_3307 | WD40 repeat. | WD domain, G-beta repeat. | 0.759 |
SCL34865.1 | SCL36611.1 | GA0070624_5103 | GA0070624_5601 | WD40 repeat. | Tetratricopeptide repeat-containing protein. | 0.585 |
SCL34865.1 | alaS | GA0070624_5103 | GA0070624_3037 | WD40 repeat. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.945 |
SCL36611.1 | SCL20419.1 | GA0070624_5601 | GA0070624_1991 | Tetratricopeptide repeat-containing protein. | Hypothetical protein. | 0.585 |
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