STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL30959.1phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein. (344 aa)    
Predicted Functional Partners:
SCL30938.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
 0.998
SCL30943.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
 0.998
SCL30949.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
 0.998
SCL30955.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
 
 0.993
SCL30982.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
 
 0.986
SCL30977.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
 
0.980
SCL30965.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
 
0.976
SCL30970.1
Virulence factor Mce family protein.
 
 
0.973
SCL30988.1
Mce-associated membrane protein.
 
  
 0.916
SCL30993.1
Mce-associated membrane protein.
 
  
 0.915
Your Current Organism:
Micromonospora rhizosphaerae
NCBI taxonomy Id: 568872
Other names: CGMCC 4.5599, DSM 45431, JCM 17737, M. rhizosphaerae, Micromonospora rhizosphaerae Wang et al. 2011, Micromonospora sp. 211018, strain 211018
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.