STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL32095.1DNA-binding transcriptional regulator, ArsR family. (109 aa)    
Predicted Functional Partners:
SCL32101.1
Phosphinothricin acetyltransferase.
       0.790
SCL32090.1
Peptidase family M28.
       0.786
SCL32084.1
Hypothetical protein.
       0.785
SCL32079.1
Hypothetical protein.
       0.731
SCL32107.1
Thioredoxin reductase.
 
     0.627
SCL32074.1
Transcriptional regulator, ArsR family.
       0.534
SCL35754.1
Transcriptional regulator, ArsR family.
  
     0.400
Your Current Organism:
Micromonospora rhizosphaerae
NCBI taxonomy Id: 568872
Other names: CGMCC 4.5599, DSM 45431, JCM 17737, M. rhizosphaerae, Micromonospora rhizosphaerae Wang et al. 2011, Micromonospora sp. 211018, strain 211018
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.