STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCL34569.1Putative drug exporter of the RND superfamily. (716 aa)    
Predicted Functional Partners:
SCL34557.1
Hypothetical protein.
       0.554
SCL34561.1
Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA).
       0.554
SCL34565.1
Hypothetical protein.
       0.554
SCL16221.1
Serine/threonine protein kinase.
   
 
 0.529
SCL37579.1
Serine/threonine protein kinase.
   
 
 0.529
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
    
 
 0.465
SCL18755.1
Transcriptional regulator, MarR family.
  
     0.434
SCL34573.1
Signal transduction histidine kinase.
       0.430
SCL34576.1
Two component transcriptional regulator, LuxR family.
       0.430
Your Current Organism:
Micromonospora rhizosphaerae
NCBI taxonomy Id: 568872
Other names: CGMCC 4.5599, DSM 45431, JCM 17737, M. rhizosphaerae, Micromonospora rhizosphaerae Wang et al. 2011, Micromonospora sp. 211018, strain 211018
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