Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL16779.1 | SCL17224.1 | GA0070624_1121 | GA0070624_1238 | Phytoene synthase. | Heptaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.969 |
SCL16779.1 | SCL19056.1 | GA0070624_1121 | GA0070624_1671 | Phytoene synthase. | Short-chain Z-isoprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.524 |
SCL16779.1 | SCL23184.1 | GA0070624_1121 | GA0070624_2689 | Phytoene synthase. | Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.524 |
SCL16779.1 | SCL37573.1 | GA0070624_1121 | GA0070624_5919 | Phytoene synthase. | Geranylgeranyl diphosphate synthase, type I; Belongs to the FPP/GGPP synthase family. | 0.965 |
SCL16779.1 | SCL38364.1 | GA0070624_1121 | GA0070624_6191 | Phytoene synthase. | Geranylgeranyl diphosphate synthase, type I; Belongs to the FPP/GGPP synthase family. | 0.948 |
SCL16779.1 | SCL38537.1 | GA0070624_1121 | GA0070624_6249 | Phytoene synthase. | Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.793 |
SCL16779.1 | idi | GA0070624_1121 | GA0070624_1118 | Phytoene synthase. | Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.959 |
SCL16779.1 | ispH | GA0070624_1121 | GA0070624_1694 | Phytoene synthase. | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.448 |
SCL17224.1 | SCL16779.1 | GA0070624_1238 | GA0070624_1121 | Heptaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | Phytoene synthase. | 0.969 |
SCL17224.1 | SCL19056.1 | GA0070624_1238 | GA0070624_1671 | Heptaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | Short-chain Z-isoprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.900 |
SCL17224.1 | SCL23184.1 | GA0070624_1238 | GA0070624_2689 | Heptaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.898 |
SCL17224.1 | SCL37567.1 | GA0070624_1238 | GA0070624_5917 | Heptaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family. | 0.492 |
SCL17224.1 | SCL37573.1 | GA0070624_1238 | GA0070624_5919 | Heptaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | Geranylgeranyl diphosphate synthase, type I; Belongs to the FPP/GGPP synthase family. | 0.896 |
SCL17224.1 | SCL38364.1 | GA0070624_1238 | GA0070624_6191 | Heptaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | Geranylgeranyl diphosphate synthase, type I; Belongs to the FPP/GGPP synthase family. | 0.878 |
SCL17224.1 | SCL38537.1 | GA0070624_1238 | GA0070624_6249 | Heptaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.949 |
SCL17224.1 | idi | GA0070624_1238 | GA0070624_1118 | Heptaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.896 |
SCL17224.1 | ispH | GA0070624_1238 | GA0070624_1694 | Heptaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.803 |
SCL19056.1 | SCL16779.1 | GA0070624_1671 | GA0070624_1121 | Short-chain Z-isoprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | Phytoene synthase. | 0.524 |
SCL19056.1 | SCL17224.1 | GA0070624_1671 | GA0070624_1238 | Short-chain Z-isoprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | Heptaprenyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.900 |
SCL19056.1 | SCL37573.1 | GA0070624_1671 | GA0070624_5919 | Short-chain Z-isoprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | Geranylgeranyl diphosphate synthase, type I; Belongs to the FPP/GGPP synthase family. | 0.953 |
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