Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCL15351.1 | SCL15354.1 | GA0070624_0697 | GA0070624_0698 | Transketolase. | Transketolase. | 0.999 |
SCL15351.1 | SCL16531.1 | GA0070624_0697 | GA0070624_1040 | Transketolase. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | 0.876 |
SCL15351.1 | SCL26830.1 | GA0070624_0697 | GA0070624_3380 | Transketolase. | Fructose-bisphosphate aldolase. | 0.759 |
SCL15351.1 | SCL39118.1 | GA0070624_0697 | GA0070624_6455 | Transketolase. | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP). | 0.764 |
SCL15354.1 | SCL15351.1 | GA0070624_0698 | GA0070624_0697 | Transketolase. | Transketolase. | 0.999 |
SCL15354.1 | SCL16531.1 | GA0070624_0698 | GA0070624_1040 | Transketolase. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | 0.876 |
SCL15354.1 | SCL26830.1 | GA0070624_0698 | GA0070624_3380 | Transketolase. | Fructose-bisphosphate aldolase. | 0.759 |
SCL15354.1 | SCL39118.1 | GA0070624_0698 | GA0070624_6455 | Transketolase. | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP). | 0.764 |
SCL16531.1 | SCL15351.1 | GA0070624_1040 | GA0070624_0697 | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | Transketolase. | 0.876 |
SCL16531.1 | SCL15354.1 | GA0070624_1040 | GA0070624_0698 | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | Transketolase. | 0.876 |
SCL16531.1 | SCL26830.1 | GA0070624_1040 | GA0070624_3380 | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | Fructose-bisphosphate aldolase. | 0.785 |
SCL16531.1 | SCL39118.1 | GA0070624_1040 | GA0070624_6455 | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP). | 0.805 |
SCL25068.1 | SCL36694.1 | GA0070624_3040 | GA0070624_5622 | Shikimate dehydrogenase; Belongs to the shikimate dehydrogenase family. | Phenazine biosynthesis protein phzE. | 0.898 |
SCL25068.1 | SCL37588.1 | GA0070624_3040 | GA0070624_5924 | Shikimate dehydrogenase; Belongs to the shikimate dehydrogenase family. | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; Belongs to the class-II DAHP synthase family. | 0.695 |
SCL25068.1 | SCL39118.1 | GA0070624_3040 | GA0070624_6455 | Shikimate dehydrogenase; Belongs to the shikimate dehydrogenase family. | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP). | 0.801 |
SCL25068.1 | aroB | GA0070624_3040 | GA0070624_3045 | Shikimate dehydrogenase; Belongs to the shikimate dehydrogenase family. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.998 |
SCL25068.1 | aroK | GA0070624_3040 | GA0070624_3042 | Shikimate dehydrogenase; Belongs to the shikimate dehydrogenase family. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.997 |
SCL25068.1 | pheA | GA0070624_3040 | GA0070624_0772 | Shikimate dehydrogenase; Belongs to the shikimate dehydrogenase family. | Prephenate dehydratase. | 0.834 |
SCL26830.1 | SCL15351.1 | GA0070624_3380 | GA0070624_0697 | Fructose-bisphosphate aldolase. | Transketolase. | 0.759 |
SCL26830.1 | SCL15354.1 | GA0070624_3380 | GA0070624_0698 | Fructose-bisphosphate aldolase. | Transketolase. | 0.759 |
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