Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDG94541.1 | SDG95385.1 | SAMN05192534_101100 | SAMN05192534_101127 | Sporulation integral membrane protein YlbJ. | Sporulation factor SpoIIGA. Unknown type peptidase. MEROPS family U04; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. | 0.801 |
| SDG94541.1 | SDG95411.1 | SAMN05192534_101100 | SAMN05192534_101128 | Sporulation integral membrane protein YlbJ. | RNA polymerase, sigma 29 subunit, SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.726 |
| SDG94541.1 | SDH10573.1 | SAMN05192534_101100 | SAMN05192534_101633 | Sporulation integral membrane protein YlbJ. | Stage II sporulation protein M; Required for complete septum migration and engulfment of the forespore compartment during sporulation. Required for stabilizing and recruiting of SpoIIP to the septal membrane. | 0.725 |
| SDG94541.1 | SDH47681.1 | SAMN05192534_101100 | SAMN05192534_10645 | Sporulation integral membrane protein YlbJ. | Sporulation protein YqfC. | 0.824 |
| SDG94541.1 | SDH50836.1 | SAMN05192534_101100 | SAMN05192534_106136 | Sporulation integral membrane protein YlbJ. | Stage III sporulation protein AB. | 0.766 |
| SDG94541.1 | SDH50918.1 | SAMN05192534_101100 | SAMN05192534_106138 | Sporulation integral membrane protein YlbJ. | Stage III sporulation protein AD. | 0.773 |
| SDG94541.1 | SDH50975.1 | SAMN05192534_101100 | SAMN05192534_106139 | Sporulation integral membrane protein YlbJ. | Stage III sporulation protein AE. | 0.777 |
| SDG94541.1 | SDI04500.1 | SAMN05192534_101100 | SAMN05192534_11948 | Sporulation integral membrane protein YlbJ. | Stage II sporulation protein R. | 0.799 |
| SDG94541.1 | SDI12414.1 | SAMN05192534_101100 | SAMN05192534_12244 | Sporulation integral membrane protein YlbJ. | Stage II sporulation protein E. | 0.763 |
| SDG94541.1 | spoIIAB | SAMN05192534_101100 | SAMN05192534_101623 | Sporulation integral membrane protein YlbJ. | Stage II sporulation protein AB (anti-sigma F factor); Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | 0.614 |
| SDG95385.1 | SDG94541.1 | SAMN05192534_101127 | SAMN05192534_101100 | Sporulation factor SpoIIGA. Unknown type peptidase. MEROPS family U04; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. | Sporulation integral membrane protein YlbJ. | 0.801 |
| SDG95385.1 | SDG95411.1 | SAMN05192534_101127 | SAMN05192534_101128 | Sporulation factor SpoIIGA. Unknown type peptidase. MEROPS family U04; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. | RNA polymerase, sigma 29 subunit, SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.922 |
| SDG95385.1 | SDH10573.1 | SAMN05192534_101127 | SAMN05192534_101633 | Sporulation factor SpoIIGA. Unknown type peptidase. MEROPS family U04; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. | Stage II sporulation protein M; Required for complete septum migration and engulfment of the forespore compartment during sporulation. Required for stabilizing and recruiting of SpoIIP to the septal membrane. | 0.804 |
| SDG95385.1 | SDH47681.1 | SAMN05192534_101127 | SAMN05192534_10645 | Sporulation factor SpoIIGA. Unknown type peptidase. MEROPS family U04; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. | Sporulation protein YqfC. | 0.758 |
| SDG95385.1 | SDH50836.1 | SAMN05192534_101127 | SAMN05192534_106136 | Sporulation factor SpoIIGA. Unknown type peptidase. MEROPS family U04; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. | Stage III sporulation protein AB. | 0.759 |
| SDG95385.1 | SDH50918.1 | SAMN05192534_101127 | SAMN05192534_106138 | Sporulation factor SpoIIGA. Unknown type peptidase. MEROPS family U04; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. | Stage III sporulation protein AD. | 0.752 |
| SDG95385.1 | SDH50975.1 | SAMN05192534_101127 | SAMN05192534_106139 | Sporulation factor SpoIIGA. Unknown type peptidase. MEROPS family U04; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. | Stage III sporulation protein AE. | 0.762 |
| SDG95385.1 | SDI04500.1 | SAMN05192534_101127 | SAMN05192534_11948 | Sporulation factor SpoIIGA. Unknown type peptidase. MEROPS family U04; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. | Stage II sporulation protein R. | 0.831 |
| SDG95385.1 | SDI12414.1 | SAMN05192534_101127 | SAMN05192534_12244 | Sporulation factor SpoIIGA. Unknown type peptidase. MEROPS family U04; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. | Stage II sporulation protein E. | 0.933 |
| SDG95385.1 | spoIIAB | SAMN05192534_101127 | SAMN05192534_101623 | Sporulation factor SpoIIGA. Unknown type peptidase. MEROPS family U04; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. | Stage II sporulation protein AB (anti-sigma F factor); Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | 0.834 |
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