STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH42274.1Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family. (198 aa)    
Predicted Functional Partners:
SDH42236.1
Hypothetical protein.
       0.743
SDH42306.1
Protease I.
       0.580
SDH42207.1
Hypothetical protein.
       0.491
msrA
Peptide-methionine (S)-S-oxide reductase/peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
       0.419
msrB
Peptide-methionine (R)-S-oxide reductase/peptide methionine sulfoxide reductase msrA/msrB.
       0.419
Your Current Organism:
Alteribacillus persepolensis
NCBI taxonomy Id: 568899
Other names: A. persepolensis, Alteribacillus persepolensis (Amoozegar et al. 2009) Didari et al. 2012, Bacillus persepolensis, Bacillus persepolensis Amoozegar et al. 2009, Bacillus sp. HS 136, CCM 7595, DSM 21632, JCM 15720, LMG 25222, LMG:25222, strain HS136
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.