STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH48373.1Cytochrome c550. (120 aa)    
Predicted Functional Partners:
SDG93696.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 0.999
SDH03311.1
Glycine/D-amino acid oxidase.
  
 0.979
SDH07091.1
Menaquinol-cytochrome c reductase cytochrome b/c subunit; Component of the menaquinol-cytochrome c reductase complex.
 
 0.979
SDH07171.1
Menaquinol-cytochrome c reductase iron-sulfur subunit.
 
 0.972
SDG93526.1
Hypothetical protein.
 
 
 0.965
SDH03568.1
Hypothetical protein.
  
 0.961
SDH07128.1
Menaquinol-cytochrome c reductase cytochrome b subunit.
 
 0.946
SDG93752.1
Cytochrome c oxidase subunit 3.
  
 0.934
SDH93060.1
Cytochrome aa3 quinol oxidase subunit 3.
  
 0.934
SDH92961.1
Protein of unknown function.
 
 0.932
Your Current Organism:
Alteribacillus persepolensis
NCBI taxonomy Id: 568899
Other names: A. persepolensis, Alteribacillus persepolensis (Amoozegar et al. 2009) Didari et al. 2012, Bacillus persepolensis, Bacillus persepolensis Amoozegar et al. 2009, Bacillus sp. HS 136, CCM 7595, DSM 21632, JCM 15720, LMG 25222, LMG:25222, strain HS136
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