STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH55105.1Acyl-CoA dehydrogenase. (382 aa)    
Predicted Functional Partners:
SDH34599.1
Electron transfer flavoprotein alpha subunit apoprotein.
 
 0.947
SDH34562.1
Electron transfer flavoprotein beta subunit.
 
 
 0.912
SDH61370.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.885
SDH55315.1
Acetyl-CoA carboxylase, carboxyltransferase component.
 
 
 0.797
SDI29331.1
Predicted kinase, aminoglycoside phosphotransferase (APT) family.
 
 0.793
SDH00298.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
 0.745
SDH91976.1
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
  0.727
SDH92350.1
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
  0.727
SDI41032.1
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
  0.727
SDH55139.1
acetyl-CoA carboxylase, biotin carboxylase subunit.
  
 
 0.714
Your Current Organism:
Alteribacillus persepolensis
NCBI taxonomy Id: 568899
Other names: A. persepolensis, Alteribacillus persepolensis (Amoozegar et al. 2009) Didari et al. 2012, Bacillus persepolensis, Bacillus persepolensis Amoozegar et al. 2009, Bacillus sp. HS 136, CCM 7595, DSM 21632, JCM 15720, LMG 25222, LMG:25222, strain HS136
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