STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH64009.1NitT/TauT family transport system substrate-binding protein. (332 aa)    
Predicted Functional Partners:
SDH63937.1
NitT/TauT family transport system permease protein.
 
 
 0.986
SDH63977.1
NitT/TauT family transport system ATP-binding protein.
 
 
 0.981
SDH56520.1
NitT/TauT family transport system permease protein.
  
 
 0.796
SDH56554.1
NitT/TauT family transport system ATP-binding protein.
  
 
 0.767
SDH02049.1
Two-component system, chemotaxis family, response regulator CheV.
    
 0.745
SDH78408.1
Taurine catabolism dioxygenase TauD, TfdA family.
  
 
 0.738
phnC-2
Phosphonate transport system ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
  
 
 0.730
gpr
GPR endopeptidase Aspartic peptidase. MEROPS family A25; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
    0.629
SDH72659.1
Chromate reductase.
  
 
 0.621
SDI09051.1
FMN reductase/FAD reductase [NAD(P)H].
  
 
 0.621
Your Current Organism:
Alteribacillus persepolensis
NCBI taxonomy Id: 568899
Other names: A. persepolensis, Alteribacillus persepolensis (Amoozegar et al. 2009) Didari et al. 2012, Bacillus persepolensis, Bacillus persepolensis Amoozegar et al. 2009, Bacillus sp. HS 136, CCM 7595, DSM 21632, JCM 15720, LMG 25222, LMG:25222, strain HS136
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